Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015819106.1_cds_XP_016499957.1_13830
CDS Infomation

[gene=LOC107818446] [db_xref=GeneID:107818446] [protein=uncharacterized protein LOC107818446 isoform X4] [protein_id=XP_016499957.1] [location=join(109459..109581,111932..112135,112330..112511,112896..113022,113109..113264,113385..114461,114585..114677,114852..114944,115111..115203,115559..115641,116715..116766,117016..117102,117200..117240,118823..118874,122384..122421,122503..123232)] [gbkey=CDS]
Sequence

ATGGGTGCCTTATCTCGTGCTTCTCTTTCTGAAGAGGAACGCAACAAAAGACTTGTTGAA
GTTGGGAATGAGCTGCTTCAGCAGCTCCCTTCTTCTAAAGAGGAGCTTCTGGAGAAACTT
GATAATTTAGAGCATCTTCTGTCAACGGTGGAGCAAGTTCCACCTGCATCGGTGCGAGAT
GCGTTTCAACCTGCAAGGGAAGCACTAGCTGCAGATGGACTTCTACGGCATCCTGACATA
GATGTGAAGGTGTCAGTTGCATCTTGCATCAGTGAGATCATGAGAATTACAGCTCCAGAT
CAACCTTATGATGATCGCATAATTCAGGAATTTTTTGAGCTTTCAGTATTGGCATTTGGG
AAATTGTCTTGCATTGATGGTTGTGGTTATTCAAAGGCTGTTTCAATTATCGAAGTTCTT
GCTAAGTACCGAACATGCATTCTGATGTTGGATCTCGAGTTAGACGCATTGGTTGTTCAG
ATGTTTCAACATTTTCTGAATAGCATAAGGCCGGACCACCCTGATCATGTATTCATGGAC
ATCGAGGAAATAATGAGCATGATGATAAAAGAGAGTGACGAAATTTCAATGGAGCTTCTG
AACATCCTGATAAGTAGTGTTAAGAAGGAAAACCAGAATGTTTCACCTCGCTCCTATATG
CTAGGAGAGAGAGTTCTTCAAATAAGTTCTGTCAAACTTTGTCCATATCTTCCAGAAGTG
AGCATTTCCACTGATGATTATTCTGAAGTTGTTGAATTGATATGGAAAGAGGCAACTAAA
AGTAAAACTACGAATGGTACAAAGTCTCTCCCTAGTTCTAGGCCAGGAGAAATTGATCAA
TTTGTGGATGGAGCATCAAAATCACGAGTGGAAAATGGTCCTGAAGAGCGTTATCATAAA
GCTGCTTGCTTTGATGACGCCTGGCCATCCACGGAAGAAACTTCCAAGTGTCTTCCAGAT
GCTGACTCTAAAGTTATTTCAGCTGATGACACTGTTGTATTATTTGAGCGATCTGCAGAG
GATTTCTTTAAGACACCGGTCAATAATGACTCAAAAGAGCTTACCCGCGGAGCTGGTTAT
GATAGCAAAGTTGGTCCATCCGTACCTGGATCTTCCAAGTCACCTACAAATGACGACTCT
AGTGAGCTTGTTGCACCACATGGTGCACCTGAGAAAGTTACTCCATTCTTAGATCAACCA
TCTGACTTGCTGGGGAAATATGACCCTGAGCATAAGGAAGATGACGTCGTTCCAGAGATG
GATACATCTTTGAAAGGATCACAATGTGGAGATGCAACAAAGCAGCAGAAAAATACAGAT
TCAAGGACCAATTCTCGACCTGAAAACTTAGGTTTCATACATGCAGCTGAAAAAGATCTA
GATTCAGAAGCTACTCAAGCTTCAAGGAAAAGAGGTTGGAAACCTAATTTTTTGAAAAAG
CCTGAGGAAGGATATGATCATGTTTGGTTAAGTGGAGAAAGGAGATCAAAAGCCTGTATT
CGCTGGAAGGATTATGCGAAAGATACTAAAAAGAGAAGTAGATGTTCACCTAAATGTGCT
ATCTCCGATGAATTGTACTTGTCATCTGGTGTGGAGAAGAATCTGAAAATGACTATAAAA
AGACGCCAAAAGGAGCAAAATGACATAATAGGTCAGAATGATGGTGCACAAATTTCATCA
ATTTCAGCAAGAAATTTACCCGGAGTTTTAACAAAGAAGAAAGTCTCACAATCTACATTG
ATTGCTTCAGAAGAATTTGTTGTCTTGGAGGCATTAGAAAAGAAACATGAAAAAGGTGAC
AAGAAAAATTTACCTGCCAGCTATCGTGATAGAAGACGGCGGTCATCAGTTAAAGAATCA
GGAATTGAGGCATTGGCTTCTCTCTCGATCACCAGCAAGAGCAACTTTGCCAATACCTCT
AAAGGTCAACGTAAGAAGGAGAACTCATCATCACAAGAAGAGGCATTGGGTTCTCTCTCA
ATCACCAAAGAAAGCAACTTTTCCAAAACCTCTAAAGAACAACATAAAAGGAAGAACTCG
CCATCACAAGAAGAGACATTGGATTCTGTTTCAATAACCAAGAAAAGGACCTTACCGAAA
GCCTCTAAAGAACAACGTAAAAGGAAGAACTTGCCATCACAAGAAGAGGATTCTGCGGAT
AAGGTTGTCAGAGAGCACGGTGAGGAGCTGATTGGCTGCAGAATAAGGGTTTGGTGGCCA
CTGGATCAAAGGTTCTATGAAGGACATATCGCCTTGTTTGACCGTTCAGAGAAGAAGCAT
ATGGTGATCTATGATGATGGTGAGGAAGAAACGCTAGATCTTACAAGTGAACGCTGGGAA
CTGGTTGTAGAGGACAATGCATCAGATCCTAGGCGAGAGATTGTTTCTGGTCCCAGTGAT
TCGTTTGACATGCGCCTTGGTTGCATCATTGATTCATATCGTCATTTAAGGAAAAAGAAG
AAGGGGAAAGCAACTGATGATCTGACTCCTCGTCCAACAAAGACCATGCAACGTGATTTA
ACTCAAAAAGGAATGCACCAAATTAAAAGGATCAAAGTTGAAGTTTCAGAATCTGAGATA
GAGGGAAATCCAATGAGCTTGACAACACCTAGAAAGGTTTCCCCAGGTTCTCCTATCGAA
GATGGTGATGAATGCTGTGAATTGGTTGATGTGCATGGCTATAAAGTAAAAGTGAGCAGT
GCTCCTACACTTGCTGCCATTTTTAGCAAGTATGGTGACATTACAGCCAACTGTCAGTAT
AAATCACCGACTGTCAAAGCTTCCCTTCTTGAGGTGGTTAGTGATGTTGTCAGGCGGCTG
AAAACCAGTGATATTGATACTAATTTTTCTGCCATTCAAGATATGAAATCTGTAGTCTCT
GATGCTGCAGATGCAAAGCTTGATGTTTCTTGGCTGCAGCAGTATCTTGAGGAGATATCC
GAAGAGGAAGATGTGAAGAAAAAGTCTTCCAATCTAATGGAGTTAAGGGTGACTACAATG
CTTGCCACTAAAGCAGCTAAAAAGGACTTGGTAGAAAGGAATGGGGAGGTCTTAGCAGCA
GAGAAACGGCTCAAAAAGGCTGAAAGGCGCTTGCAAGAGGCGCAAAGCCGAGCAGGAGAG
GCAGAAAGGTTTGTCAAAGTATTTGAAATACTGGGTGAAAAGGTTCAGCAGGACATCGAG
CAGTGTAAGGATGCACTATATTGGCAGAGTAGGTCGAATGACCTTCTGTAG

Peptide Sequence

PEP ID

XP_016499957.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107818446 isoform X4 [Nicotiana tabacum]
Sequence

MGALSRASLSEEERNKRLVEVGNELLQQLPSSKEELLEKLDNLEHLLSTVEQVPPASVRD
AFQPAREALAADGLLRHPDIDVKVSVASCISEIMRITAPDQPYDDRIIQEFFELSVLAFG
KLSCIDGCGYSKAVSIIEVLAKYRTCILMLDLELDALVVQMFQHFLNSIRPDHPDHVFMD
IEEIMSMMIKESDEISMELLNILISSVKKENQNVSPRSYMLGERVLQISSVKLCPYLPEV
SISTDDYSEVVELIWKEATKSKTTNGTKSLPSSRPGEIDQFVDGASKSRVENGPEERYHK
AACFDDAWPSTEETSKCLPDADSKVISADDTVVLFERSAEDFFKTPVNNDSKELTRGAGY
DSKVGPSVPGSSKSPTNDDSSELVAPHGAPEKVTPFLDQPSDLLGKYDPEHKEDDVVPEM
DTSLKGSQCGDATKQQKNTDSRTNSRPENLGFIHAAEKDLDSEATQASRKRGWKPNFLKK
PEEGYDHVWLSGERRSKACIRWKDYAKDTKKRSRCSPKCAISDELYLSSGVEKNLKMTIK
RRQKEQNDIIGQNDGAQISSISARNLPGVLTKKKVSQSTLIASEEFVVLEALEKKHEKGD
KKNLPASYRDRRRRSSVKESGIEALASLSITSKSNFANTSKGQRKKENSSSQEEALGSLS
ITKESNFSKTSKEQHKRKNSPSQEETLDSVSITKKRTLPKASKEQRKRKNLPSQEEDSAD
KVVREHGEELIGCRIRVWWPLDQRFYEGHIALFDRSEKKHMVIYDDGEEETLDLTSERWE
LVVEDNASDPRREIVSGPSDSFDMRLGCIIDSYRHLRKKKKGKATDDLTPRPTKTMQRDL
TQKGMHQIKRIKVEVSESEIEGNPMSLTTPRKVSPGSPIEDGDECCELVDVHGYKVKVSS
APTLAAIFSKYGDITANCQYKSPTVKASLLEVVSDVVRRLKTSDIDTNFSAIQDMKSVVS
DAADAKLDVSWLQQYLEEISEEEDVKKKSSNLMELRVTTMLATKAAKKDLVERNGEVLAA
EKRLKKAERRLQEAQSRAGEAERFVKVFEILGEKVQQDIEQCKDALYWQSRSNDLL

Transcript Sequence

Gene sequence data has not been registered.